Bandpass calibration of a wideband spectrometer using coherent pulse injection

We present a relatively simple time domain method for determining the bandpass response of a system by injecting a nanosecond pulse and capturing the system voltage output. A pulse of sub-nanosecond duration contains all frequency components with nearly constant amplitude up to 1 GHz. Hence, this method can accurately determine the system bandpass response to a broadband signal. In a novel variation on this impulse response method, a train of pulses is coherently accumulated providing precision calibration with a simple system. The basic concept is demonstrated using a pulse generator-accumulator setup realised in a Bedlam board which is a high speed digital signal processing unit. The same system was used at the Parkes radio telescope between 2–13 October 2013 and we demonstrate its powerful diagnostic capability. We also present some initial test data from this experiment.     

The Upper Pliocene Bowden shell beds,southeast Jamaica

The Neogene fossil record of the Antilles is particularly rich and can satisfy the interests of most collectors, from foraminifers to vertebrates. The molluscs are among the commonest and most diverse groups, being found in both terrestrial and marine deposits. The Pliocene Bowden shell beds of southeast Jamaica, best known for its hundreds of species of molluscs, also yields diverse members of other groups, the total exceeding 800 species from a mere 5 m of stratigraphical section.     

New interpretation of the Franciscan mélange at San Simeon coast,California: tectonic intrusion into an accretionary prism

Many concepts and interpretations on the formation of the Franciscan mélange have been proposed on the basis of exposures at San Simeon, California. In this paper, we show the distribution of chaotic rocks, their internal structures and textures, and the interrelationship between the chaotic rocks and the surrounding sandstones (turbidites). Mélange components, particularly blueschists, oceanic rocks, including greenstone, pillow lava, bedded chert, limestone, sandstone, and conglomerate, have all been brecciated by retrograde deformation. The Cambria Slab, long interpreted as a trench slope basin, is also strongly deformed by fluidization, brecciation, isoclinal folding, and thrusting, leading us to a new interpretation that turbiditic rocks (including the Cambria Slab) represent trench deposits rather than slope basin sediments. These rocks form an accretionary prism above mélanges that were diapirically emplaced into these rocks first along sinistral-thrust faults, and then along dextral-normal faults. Riedel shear systems are observed in several orders of scale in both stages. Although the exhumation of the blueschist blocks is still controversial, the common extensional fractures and brecciation in most of the blocks in the mélanges and further mixture of various lithologies into one block with mélange muddy matrix indicate that once deeply buried blocks were exhumed from considerable depths to the accretionary prism body, before being diapirically intruded with their host mélange along thrust and normal faults, during which retrograde deformation occurred together with retrograde metamorphism. Recent similar examples of high-pressure rock exhumation have been documented along the Sofugan Tectonic Line in the Izu forearc areas, in the Mineoka belt in the Boso Peninsula, and as part of accretionary prism development in the Nankai and Sagami troughs of Japan. These modern analogues provide actively forming examples of the lithological and deformational features that characterize the Franciscan mélange processes.     

Coupled finite‐element simulation of injection well testing in unconsolidated oil sands reservoir

This paper presents a finite‐element (FE) model for simulating injection well testing in unconsolidated oil sands reservoir. In injection well testing, the bottom‐hole pressure (BHP) is monitored during the injection and shut‐in period. The flow characteristics of a reservoir can be determined from transient BHP data using conventional reservoir or well‐testing analysis. However, conventional reservoir or well‐testing analysis does not consider geomechanics coupling effects. This simplified assumption has limitations when applied to unconsolidated (uncemented) oil sands reservoirs because oil sands deform and dilate subjected to pressure variation. In addition, hydraulic fracturing may occur in unconsolidated oil sands when high water injection rate is used. This research is motivated in numerical modeling of injection well testing in unconsolidated oil sands reservoir considering the geomechanics coupling effects including hydraulic fracturing. To simulate the strong anisotropy in mechanical and hydraulic behaviour of unconsolidated oil sands induced by fluid injection in injection well testing, a nonlinear stress‐dependent poro‐elasto‐plastic constitutive model together with a strain‐induced anisotropic permeability model are formulated and implemented into a 3D FE simulator. The 3D FE model is used to history match the BHP response measured from an injection well in an oil sands reservoir. Copyright © 2013 John Wiley & Sons, Ltd.     

Dissolved oxygen as an indicator of bioavailable dissolved organic carbon in groundwater

Concentrations of dissolved oxygen (DO) plotted vs. dissolved organic carbon (DOC) in groundwater samples taken from a coastal plain aquifer of South Carolina (SC) showed a statistically significant hyperbolic relationship. In contrast, DO-DOC plots of groundwater samples taken from the eastern San Joaquin Valley of California (CA) showed a random scatter. It was hypothesized that differences in the bioavailability of naturally occurring DOC might contribute to these observations. This hypothesis was examined by comparing nine different biochemical indicators of DOC bioavailability in groundwater sampled from these two systems. Concentrations of DOC, total hydrolysable neutral sugars (THNS), total hydrolysable amino acids (THAA), mole% glycine of THAA, initial bacterial cell counts, bacterial growth rates, and carbon dioxide production/consumption were greater in SC samples relative to CA samples. In contrast, the mole% glucose of THNS and the aromaticity (SUVA(254)) of DOC was greater in CA samples. Each of these indicator parameters were observed to change with depth in the SC system in a manner consistent with active biodegradation. These results are uniformly consistent with the hypothesis that the bioavailability of DOC is greater in SC relative to CA groundwater samples. This, in turn, suggests that the presence/absence of a hyperbolic DO-DOC relationship may be a qualitative indicator of relative DOC bioavailability in groundwater systems.     

Recent explosive eruptions and volcano hazards at Soputan volcano—a basalt stratovolcano in north Sulawesi, Indonesia

Soputan is a high-alumina basalt stratovolcano located in the active North Sulawesi-Sangihe Islands magmatic arc. Although immediately adjacent to the still geothermally active Quaternary Tondono Caldera, Soputan’s magmas are geochemically distinct from those of the caldera and from other magmas in the arc. Unusual for a basalt volcano, Soputan produces summit lava domes and explosive eruptions with high-altitude ash plumes and pyroclastic flows—eight explosive eruptions during the period 2003–2011. Our field observations, remote sensing, gas emission, seismic, and petrologic analyses indicate that Soputan is an open-vent-type volcano that taps basalt magma derived from the arc-mantle wedge, accumulated and fractionated in a deep-crustal reservoir and transported slowly or staged at shallow levels prior to eruption. A combination of high phenocryst content, extensive microlite crystallization and separation of a gas phase at shallow levels results in a highly viscous basalt magma and explosive eruptive style. The open-vent structure and frequent eruptions indicate that Soputan will likely erupt again in the next decade, perhaps repeatedly. Explosive eruptions in the Volcano Explosivity Index (VEI) 2–3 range and lava dome growth are most probable, with a small chance of larger VEI 4 eruptions. A rapid ramp up in seismicity preceding the recent eruptions suggests that future eruptions may have no more than a few days of seismic warning. Risk to population in the region is currently greatest for villages located on the southern and western flanks of the volcano where flow deposits are directed by topography. In addition, Soputan’s explosive eruptions produce high-altitude ash clouds that pose a risk to air traffic in the region.     

Differential developmental toxicity of naphthoic acid isomers in medaka (Oryzias latipes) embryos

Polycyclic aromatic hydrocarbons (PAHs) are widespread persistent pollutants that readily undergo biotic and abiotic conversion to numerous transformation products in rivers, lakes and estuarine sediments. Here we characterize the developmental toxicity of four PAH transformation products each structural isomers of hydroxynaphthoic acid: 1H2NA, 2H1NA, 2H3NA, and 6H2NA. Medaka fish (Oryzias latipes) embryos and eleutheroembryos were used to determine toxicity. A 96-well micro-plate format was used to establish a robust, statistically significant platform for assessment of early life stages. Individual naphthoic acid isomers demonstrated a rank order of toxicity with 1H2NA > 2H1NA > 2H3NA > 6H2NA being more toxic. Abnormalities of circulatory system were most pronounced including pericardial edema and tube heart. To determine if HNA isomers were AhR ligands, spatial-temporal expression and activity of CYP1A was measured via in vivo EROD assessments. qPCR measurement of CYP1A induction proved different between isomers dosed at respective concentrations affecting 50% of exposed individuals (EC50s). In vitro, all ANH isomers transactivated mouse AhR using a medaka CYP1A promoter specific reporter assay. Circulatory abnormalities followed P450 induction and response was consistent with PAH toxicity. A 96-well micro-plates proved suitable as exposure chambers and provided statistically sound evaluations as well as efficient toxicity screens. Our results demonstrate the use of medaka embryos for toxicity analysis thereby achieving REACH objectives for the reduction of adult animal testing in toxicity evaluations.     

Discovery of possible mega-thrust earthquake along the Seram Trough from records of 1629 tsunami in eastern Indonesian region

Arthur Wichmann’s “Earthquakes of the Indian Archipelago” documents several large earthquakes and tsunami throughout the Banda Arc region that can be interpreted as mega-thrust events. However, the source regions of these events are not known. One of the largest and well-documented events in the catalog is the great earthquake and tsunami affecting the Banda Islands on August 1, 1629. It caused severe damage from a 15-m tsunami that arrived at the Banda Islands about a half hour after violent shaking stopped. The earthquake was also recorded 230 km away in Ambon, but no tsunami is mentioned. This event was followed by at least 9 years of uncommonly frequent seismic activity in the region that tapered off with time, which can be interpreted as aftershocks. The combination of these observations indicates that the earthquake was most likely a mega-thrust event. We use an inverse modeling approach to numerically reconstruct the tsunami, which constrains the likely location and magnitude of the 1629 earthquake. Only, linear numerical models are applied due to the low resolution of bathymetry in the Banda Islands and Ambon. Therefore, we apply various wave amplification factors (1.5–4) derived from simulations of recent, well-constrained tsunami to bracket the upper and lower limits of earthquake moment magnitudes for the event. The closest major earthquake sources to the Banda Islands are the Tanimbar and Seram Troughs of the Banda subduction/collision zone. Other source regions are too far away for such a short arrival time of the tsunami after shaking. Moment magnitudes predicted by the models in order to produce a 15-m tsunami are M_w of 9.8–9.2 on the Tanimbar Trough and M_w 8.8–8.2 on the Seram Trough. The arrival times of these waves are 58 min for Tanimbar Trough and 30 min for Seram Trough. The model also predicts 5-m run-up for Ambon from a Tanimbar Trough source, which is inconsistent with the historical records. Ambon is mostly shielded from a wave generated by a Seram Trough source. We conclude that the most likely source of the 1629 mega-thrust earthquake is the Seram Trough. Only one earthquake >M_w 8.0 is recorded instrumentally from the eastern Indonesia region although high rates of strain (50–80 mm/a) are measured across the Seram section of the Banda subduction zone. Enough strain has already accumulated since the last major historical event to produce an earthquake of similar size to the 1629 event. Due to the rapid population growth in coastal areas in this region, it is imperative that the most vulnerable coastal areas prepare accordingly.